predictNMB - Evaluate Clinical Prediction Models by Net Monetary Benefit
Estimates when and where a model-guided treatment strategy may outperform a treat-all or treat-none approach by Monte Carlo simulation and evaluation of the Net Monetary Benefit. Details can be viewed in Parsons et al. (2023) <doi:10.21105/joss.05328>.
Last updated 4 months ago
6.23 score 10 stars 17 scripts 200 downloads
GLMMcosinor - Fit a Cosinor Model Using a Generalized Mixed Modeling Framework
Allows users to fit a cosinor model using the 'glmmTMB' framework. This extends on existing cosinor modeling packages, including 'cosinor' and 'circacompare', by including a wide range of available link functions and the capability to fit mixed models. The cosinor model is described by Cornelissen (2014) <doi:10.1186/1742-4682-11-16>.
Last updated 3 days ago
5.59 score 1 stars 9 scripts 145 downloadscircacompare - Analyses of Circadian Data
Uses non-linear regression to statistically compare two circadian rhythms. Groups are only compared if both are rhythmic (amplitude is non-zero). Performs analyses regarding mesor, phase, and amplitude, reporting on estimates and statistical differences, for each, between groups. Details can be found in Parsons et al (2020) <doi:10.1093/bioinformatics/btz730>.
Last updated 10 months ago
5.02 score 7 stars 10 scripts 333 downloadssimMetric - Metrics (with Uncertainty) for Simulation Studies that Evaluate Statistical Methods
Allows users to quickly apply individual or multiple metrics to evaluate Monte Carlo simulation studies.
Last updated 2 years ago
2.70 score 2 scripts 138 downloads